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Clarification about GPU support for GATK #9282

@samfux84

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@samfux84

Hi,

I would like to ask about GPU support for GATK.

https://gatk.broadinstitute.org/hc/en-us/articles/360035531632-Hardware-optimizations-SSD-CPU-GPU-FPGA-TPU

mentions that GATK does not have GPU support.

But the Nvidia page

https://docs.nvidia.com/clara/parabricks/latest/documentation/tooldocs/man_germline.html

presents the GATK germline workflow with GPU support. Is this a single workflow that Nvidia ported to GPU or is this GPU support also available in the default GATK installation?

Best regards

Sam

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