Not working properly for PacBio MAS-Iso-Seq Data

[mbroad1]

Hello,

I've used transcriptclean before to clean up both Nanopore and PacBio Iso-Seq data and it has worked nicely on those long-read datasets, but recently, I tested it out on Kinnex MAS-Iso-Seq data and noticed that transcriptclean was not working properly on this kind of data because there was zero output in the .log file.

Could you please modify transcriptclean so that it can also clean up MAS-Iso-Seq data? Test data can be found here: https://downloads.pacbcloud.com/public/dataset/MAS-Seq/

Thank you,
Mia