Load clinical analysis into BioNetDB (Neo4J database) #53
Description
In order to support clinical variant analysis such as Tiering, TEAM, or cancer analysis..., BioNetDB has to allow users to load clinical analysis interpretations that includes primary and secondary findings (ReportedVariant objects) and evidences (ReportedEvent objects) with tier, clinical significance, consequence types...
The goal is to load just clinical analysis into an existing graph database (Neo4J) that already contains genes, proteins, miRNAs and system biology information (i.e., pathways, reactions, complexes,...)
In addtion, a command line should be provided, e.g.:
./bionetdb.sh load --input clinical-analysis.json.gz --data-type clinical-analysis