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1. BRAID BRAID Public

   BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

   216 10

2. equifold equifold Public

   Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

   Python 126 20

3. scimilarity scimilarity Public

   A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

   Python 227 19

4. polygraph polygraph Public

   Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

   Jupyter Notebook 38

5. gReLU gReLU Public

   gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

   Python 310 49

6. gneprop gneprop Public

   GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

   Jupyter Notebook 29 2