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PDBTools.jl

A lightweight and flexible Julia package for handling structure files with ease.

What Makes it Special?

  • Molecular Dynamics: Designed to provide support for MD simulation analysis. See also MolSimToolkit.jl.
  • Simple but Powerful: Read and write PDB and mmCIF structure files with minimal overhead.
  • Flexible Atom Selection: Use intuitive syntax or custom Julia functions.
  • Lightweight: Focus on atomic data without the overhead of metadata parsing and compact data structures. Can handle very large structures.
  • Performance: Expect analysis functions to be fast. For instance, SASA and hydrogen bonds analyses are among the fastest available.

Documentation

https://m3g.github.com/PDBTools.jl

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Read, write and manipulate atomic systems in PDB and mmCIF formats

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