Repositories list

• ScorePackage

  Public
  Helper functions for Score2 analysis

  0•1•0•0•Updated Jan 23, 2024Jan 23, 2024

• CoRe

  Public
  R package for the identification of core-fitness and common-essential genes from joint analyses of multiple genome-wide CRISPR-Cas9 screens

  Jupyter Notebook

  •4•9•1•2•Updated Jul 6, 2023Jul 6, 2023

• HT29benchmark

  Public
  R package for benchmarking genome-wide CRISPR-Cas9 knock-out viability screening pipelines making use of a reference dataset from six high-quality screens of the HT29 cell line

  TeX

  •3•2•0•0•Updated Sep 13, 2022Sep 13, 2022

• IntegratedCRISPR

  Public
  Code for integration and evaluation of Broad and Sanger Institutes CRISPR-Cas9 screens

  R

  •

  GNU General Public License v3.0

  •2•5•0•0•Updated Feb 3, 2021Feb 3, 2021

• IntCRISPR

  Public
  Functions for Integrating CRISPR profiles

  R

  •0•1•0•0•Updated Feb 1, 2021Feb 1, 2021

• Comparative-Analysis

  Public
  Scripts to perform analysis in Agreement between two large pan-cancer CRISPR-Cas9 gene dependency datasets

  Jupyter Notebook

  •8•13•0•0•Updated Dec 5, 2019Dec 5, 2019

• ADAM2

  Public
  ADAM2 R package for identification of essential genes using genome-wide CRISPR-Cas9 screens

  R

  •1•5•0•0•Updated Nov 28, 2019Nov 28, 2019