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    19 repositories

    • CommSub

      Public
      Examine the effect of rhythms on the standard communication subspace
      MATLAB
      •0•0•0•0•Updated Aug 11, 2025Aug 11, 2025

    • 2025_NBIO_207A

      Public
      Data Analysis Class, Spring 2025, Shantanu Jadhav
      Jupyter Notebook
      •4•1•0•1•Updated Apr 29, 2025Apr 29, 2025

    • PrefrontalRipples

      Public
      MATLAB
      •0•0•0•0•Updated May 22, 2024May 22, 2024

    • GeometricTransformationProtocol

      Public
      MATLAB
      •0•0•0•0•Updated Jun 28, 2023Jun 28, 2023

    • ms4_pipeline

      Public
      jlab mountainsort 4 pipeline to filter framework
      Python
      •0•0•0•0•Updated May 19, 2023May 19, 2023

    • GeometricTransformation

      Public
      Code accompanying the paper: Tang, W., Shin, J. D. & Jadhav, S. P. (2023). Geometric transformation of cognitive maps for generalization across hippocampal-prefrontal circuits. Cell Reports
      MATLAB
      •
      Apache License 2.0
      •1•1•0•0•Updated Mar 16, 2023Mar 16, 2023

    • Jadhav-Lab-Codes-JHB

      Public
      Code repositories from Jadhav Lab
      MATLAB
      •
      Apache License 2.0
      •4•0•0•0•Updated Jan 4, 2023Jan 4, 2023

    • TrodesDataProcess

      Public
      A collection of bash (and some matlab) scripts to automatically carry out much of the data processing pipeline on nested folders containing Trodes data files. It basically crawls recursively through a folder structure and carries out Export functions (on multiple cores as background shell processes) and TrodesToMatlab on each processable datum.
      Shell
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 3, 2022Dec 3, 2022

    • SpikeGadgets_OpenEphys_Drive

      Public
      A tetrode hyper drive adapted from open ephys to work with spikegadgets
      G-code
      •
      Creative Commons Zero v1.0 Universal
      •2•0•0•0•Updated Dec 3, 2022Dec 3, 2022

    • USV_Analysis

      Public
      for analyzing USVs
      MATLAB
      •1•1•0•0•Updated Nov 24, 2022Nov 24, 2022

    • MyChronux

      Public
      Manage edits to chronux
      MATLAB
      •
      Other
      •0•0•0•0•Updated Jun 29, 2022Jun 29, 2022

    • VocalMat

      Public
      Analysis of ultrasonic vocalizations from mice using computer vision and machine learning
      MATLAB
      •
      Apache License 2.0
      •12•0•0•0•Updated Oct 29, 2021Oct 29, 2021

    • ONIX

      Public
      ONI-compatible hardware, firmware, and host APIs for advanced neuroscience experiments.
      HTML
      •
      Other
      •21•0•0•0•Updated Jun 8, 2021Jun 8, 2021

    • ThetaSequencesInREM

      Public
      Hippocampal theta sequences in REM sleep during spatial learning
      HTML
      •0•1•0•0•Updated Apr 21, 2021Apr 21, 2021

    • MazeCode

      Public
      Repository of code used for various maze designs. The code is written in StateScript, which is compiled to control SpikeBox micro-controller.
      Scala
      •2•0•3•0•Updated Mar 25, 2021Mar 25, 2021

    • rsync-backup

      Public
      python based rsync gui for rig computers
      Python
      •0•0•0•0•Updated Sep 26, 2016Sep 26, 2016

    • ExperimentalTrodesModule

      Public
      A place for experimentation, free from judgment
      0•0•0•0•Updated Dec 18, 2015Dec 18, 2015

    • Reward

      Public
      Eagle
      •3•0•0•2•Updated Sep 18, 2015Sep 18, 2015

    • JadhavLabWebpage

      Public
      JadhavLabWebpage
      JavaScript
      •1•1•0•0•Updated Aug 9, 2015Aug 9, 2015