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@sys-bio

UW Sauro Lab

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  1. tellurium tellurium Public

    Python Environment for Modeling and Simulating Biological Systems

    Python 130 40

  2. roadrunner roadrunner Public

    Forked from AndySomogyi/sbmlsolver

    libRoadRunner: A high-performance SBML simulator

    C++ 55 28

Repositories

Showing 10 of 118 repositories
  • SBMLNetwork Public Forked from adelhpour/SBMLNetwork

    SBMLNetwork is a library designed to enable software developers and systems biologists to interact with the graphical representation of SBML (Systems Biology Markup Language) models.

    sys-bio/SBMLNetwork’s past year of commit activity
    C++ 2 MIT 1 7 0 Updated Dec 25, 2025
  • roadrunner Public Forked from AndySomogyi/sbmlsolver

    libRoadRunner: A high-performance SBML simulator

    sys-bio/roadrunner’s past year of commit activity
    C++ 55 36 74 (1 issue needs help) 3 Updated Dec 20, 2025
  • AAAIM Public
    sys-bio/AAAIM’s past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Dec 18, 2025
  • WebIridium Public

    Web-based simulation and analysis of biological models

    sys-bio/WebIridium’s past year of commit activity
    TypeScript 2 1 12 2 Updated Dec 14, 2025
  • SimpleSEDML Public

    A simple API for using the Simulation Experiment Description Markup Language (SED-ML)

    sys-bio/SimpleSEDML’s past year of commit activity
    Jupyter Notebook 0 MIT 1 2 1 Updated Dec 5, 2025
  • tellurium Public

    Python Environment for Modeling and Simulating Biological Systems

    sys-bio/tellurium’s past year of commit activity
    Python 130 Apache-2.0 40 128 4 Updated Dec 5, 2025
  • BMCA-evals Public Forked from janisshin/BMCA-pipeline
    sys-bio/BMCA-evals’s past year of commit activity
    Jupyter Notebook 1 MIT 1 0 0 Updated Dec 2, 2025
  • BiomodelsStore Public Forked from konankisa/BiomodelsStore
    sys-bio/BiomodelsStore’s past year of commit activity
    JavaScript 0 1 0 0 Updated Dec 1, 2025
  • libroadrunner-deps Public

    Dependencies for libroadrunner

    sys-bio/libroadrunner-deps’s past year of commit activity
    CMake 3 5 0 2 Updated Nov 26, 2025
  • poco Public Forked from pocoproject/poco

    The POCO C++ Libraries are powerful cross-platform C++ libraries for building network- and internet-based applications that run on desktop, server, mobile, IoT, and embedded systems.

    sys-bio/poco’s past year of commit activity
    C++ 0 2,372 0 0 Updated Nov 26, 2025
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